Kenji Nagai *        
Kohei Imura Izumi Iwakura Kaoru Ohta Gen Sazaki Yuki Sudo
Shinsuke Takagi Hiromichi Niikura Satoshi Nishimura Tsuyoshi Fukaminato Yuichi Fujita

* 5Years

Yuki Sudo

2014
Authors:
Tsukamoto, T., Demura, M., & Sudo, Y.
Title:
Irreversible Trimer to Monomer Transition of Thermophilic Rhodopsin upon Thermal Stimulation
Journal:
J. Phys. Chem. B 118, 12383-12394 (2014)
2014
Authors:
Yomoda, H., Makino, Y., Tomonaga, Y., Hidaka, T., *Kawamura, I., Okitsu, T., Wada, A., Sudo, Y., & Naito, A.
Title:
Color discriminating retinal configurations of sensory rhodopsin I by photo-irradiation solid state NMR spectroscopy
Journal:
Angew. Chem. Int. Ed. 53, 6960-6964 (2014)
2014
Authors:
Sudo, Y., Mizuno, M., Wei, Z., Takeuchi, S., Tahara, T., & Mizutani, Y.
Title:
The early steps in the photocycle of a photosensor protein sensory rhodopsin I from Salinibacter ruber
Journal:
J. Phys. Chem. B 118, 1510-1518 (2014)
2013
Authors:
Tsukamoto, T., Inoue, K., Kandori, H., & Sudo, Y.
Title:
Thermal and spectroscopic characterization of a proton pumping rhodopsin from an extreme thermophile
Journal:
J. Biol. Chem. 288, 21581-21592 (2013)【Faculty of 1000 Biology “Recommended” 】
2013
Authors:
Sudo, Y., Okazaki, A., Ono, H., Yagasaki, J., Sugo, S., Kamiya, M., Reissig, L., Inoue, K., Ihara, K., Kandori, H., Takagi, S., & Hayashi, S.
Title:
A blue-shifted light-driven proton pump for neural silencing
Journal:
J. Biol. Chem. 288, 20624-20632 (2013)
2013
Authors:
Mori, A., Yagasaki, J., Homma, M., Reissig, L., & Sudo, Y.
Title:
Investigation of the chromophore binding cavity in the 11-cis acceptable microbial rhodopsin MR
Journal:
Chem. Phys. 419, 23-29 (2013)
2013
Authors:
Furutani, Y., Okitsu, T., Reissig, L., Mizuno, M., Homma, M., Wada, A., Mizutani, Y., and *Sudo, Y.
Title:
Large spectral change due to amide modes of a β-sheet upon the formation of an early photointermediate of middle rhodopsin
Journal:
J. Phys. Chem. B 117, 3449-3458 (2013)
2012
Authors:
Reissig, L., Iwata, T., Kikukawa, T., Demura, M., Kamo, N., Kandori, H., and *Sudo, Y.
Title:
The influence of halide binding on the hydrogen bonding network in the active site of Salinibacter sensory rhodopsin I
Journal:
Biochemistry 51, 8802-8813 (2012)
2012
Authors:
Irieda, H., Morita, T., Maki, K., Homma, M., Aiba, H., and *Sudo, Y.
Title:
Photo-induced regulation of the chromatic adaptive gene expression by Anabaena sensory rhodopsin
Journal:
J. Biol. Chem. 287, 32485-32493 (2012)
2012
Authors:
Inoue, K., Reissig, L., Sakai, M., Kobayashi, S., Homma, M., Fujii, M., Kandori, H., and *Sudo, Y.
Title:
Absorption spectra and photochemical reactions in a unique photoactive protein, middle rhodopsin MR
Journal:
J. Phys. Chem. B 116, 5888-5899 (2012)
2012
Authors:
Okazaki, A., Sudo, Y., and *Takagi, S.
Title:
Optical silencing of C. elegans cells with arch proton pump
Journal:
PLoS One 7, e35370 (2012)
2011
Authors:
Tomonaga, Y., Hidaka, T,, Kawamura, I,, Nishio, T,, Ohsawa, K,, Okitsu, T,, Wada, A,, Sudo, Y,, Kamo, N,, Ramamoorthy, A,, and *Naito, A.
Title:
An active photoreceptor intermediate revealed by in situ photoirradiated solid-state NMR spectroscopy
Journal:
Biophysical Journal, Vol.101 No10 L50-52 (2011)
2011
Authors:
Sudo, Y., Tanaka, R., Kobayashi, T., Kamo, N., Kohno, T., Kojima, C.
Title:
Functional expression of a two-transmembrane HtrII protein using cell-free synthesis
Journal:
BIophysics 7, 51-58(2011)
2011
Authors:
Irieda, H., Reissig, L., Kawanabe, A., Homma, M., Kandori, H., *Sudo, Y.
Title:
Structural characteristics around the b-ionone ring of the retinal chromophore in Salinibacter sensory rhodopsin I
Journal:
Biochemistry 50, 4912-4922(2011)
2011
Authors:
*Inoue, K., Sudo, Y., Homma, M., and Kandori, H.
Title:
Spectrally silent intermediates during the photochemical reactions of Salinibacter sensory rhodopsin I
Journal:
Journal of Physical Chemistry B, Vol.115, No15 4500-4508 (2011)
2011
Authors:
Mizuno, M., Sudo, Y., Homma, M., and *Mizutani, Y.
Title:
Direct observation of the structural change of Tyr174 in the primary reactions sensory rhodopsin II
Journal:
Biochemistry, Vol.50 No.15 3170-3180 (2011)
2011
Authors:
*Sudo, Y., Yuasa, Y., Shibata, J., Suzuki, D., and Homma, M.
Title:
Spectral tuning in sensory rhodopsin I from Salinibacter ruber
Journal:
Journal of Biological Chemistry, Vol.286 No.13 11328-11336 (2011)
2011
Authors:
*Sudo, Y., Ihara, K., Kobayashi, S., Suzuki, D., Irieda, H., Kikukawa, T., Kandori, H., and Homma, M.
Title:
A microbial rhodopsin with a unique retinal composition shows both sensory rhodopsin II and bacteriorhodopsin-like properties
Journal:
Journal of Biological Chemistry, Vol.286 No.8 5967-5976 (2011)
2010
Authors:
*Kandori, H., Sudo, Y., and Furutani, Y.
Title:
Protein-protein interaction changes in an archaeal light-signal transduction
Journal:
Journal of Biomedicine and Biotechnology 2010:424760 (14 pages). (2010)
2010
Authors:
Suzuki, D., Irieda, H., Homma, M., Kawagishi, I. and *Sudo, Y.
Title:
Phototactic and chemotactic signal transduction by transmembrane receptors and transducers in microorganisms
Journal:
Sensors, Vol.10 No.4 4010-4039 (2010)
2010
Authors:
Yagasaki, J., Suzuki, D., Ihara, K., Inoue, K., Kikukawa, T., Sakai, M., Fujii, M., Homma, M., Kandori, H., and Sudo, Y.
Title:
Spectroscopic studies of a sensory rhodopsin I homologue from the archaeon Haloarcula vallismortis
Journal:
Biochemistry, Vol.49 No.6 1183-1190 (2010)
2009
Authors:
Sudo, Y., Kitade, Y., Furutani, Y., Kojima, M., Kojima, S., Homma, M., and *Kandori, H.
Title:
Interaction between Na(+) ion and carboxylates of the PomA-PomB stator unit studied by ATR-FTIR spectroscopy
Journal:
Biochemistry, Vol.48 No.49 11699-11705 (2009)
2009
Authors:
*Sudo, Y., Okada, A., Suzuki, D., Inoue, K., Irieda, H., Sakai, M., Fujii, M., Furutani, Y., Kandori, H., and Homma, M.
Title:
Characterization of a signaling complex composed of sensory rhodopsin I and its cognate transducer protein from the eubacterium Salinibacter ruber
Journal:
Biochemistry, Vol.48 No.42 10136-10145 (2009)
2009
Authors:
Kojima, S., *Imada, K., Sakuma, M., Sudo, Y., Kojima, C., Minamino, T., *Homma, M., and *Nammba, K.
Title:
Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Journal:
Molecular Microbiology Vol.73 No.4 710-718 (2009)
2009
Authors:
Suzuki, D., Furutani, Y., Inoue, K., Kikukawa, T., Sakai, M., Fujii, M., Kandori, H., Homma, M. and *Sudo, Y.
Title:
Effects of chloride ion binding on the photochemical properties of Salinibacter sensory rhodopsin I
Journal:
Journal of Molecular Biology, Vol.392 No.1 48-62(2009) 【朝日新聞7/15, 科学新聞7/24, 中日新聞7/19, 時事通信7/14, 共同通信7/18】
2009
Authors:
*Sudo, Y., Terashima, H., Abe-Yoshizumi, R., Kojima, S. and Homma, M.
Title:
Comparative study of the ion flux pathway in stator units of proton- and sodium-driven flagellar motors
Journal:
Biophysics, Vol.5 45-52 (2009)
2008
Authors:
Suzuki, D., Sudo, Y., Furutani, Y., Takahashi, H., Homma, M. and *Kandori, H.
Title:
Structural changes of Salinibacter sensory rhodopsin I upon formation of K and M intermediates
Journal:
Biochemistry, Vol.47 No.48 12750-12759 (2008)
2008
Authors:
Furutani, Y., Sudo, Y. and *Kandori, H.
Title:
FTIR studies of protein-protein interaction changes between pharaonis phoborhodopsin and its cognate transducer protein
Journal:
Current Topics in Biochemical Research Vo.10 63-77 (2008)
2008
Authors:
Suzuki, D., Kitajima-Ihara, T., Furutani, Y., Ihara, K., Kandori, H., Homma, M. and *Sudo, Y.
Title:
A photochromic photoreceptor from a eubacterium
Journal:
Integrative and Communicative Biology, Vol.1 No.2 150-152.